diff --git a/data-raw/cowmilkYield3.R b/data-raw/cowmilkYield3.R new file mode 100644 index 0000000000000000000000000000000000000000..0a0a56ec1919fca42cab8c7f36091b52e822c6a2 --- /dev/null +++ b/data-raw/cowmilkYield3.R @@ -0,0 +1,67 @@ +##---------------------------------------------------------------------- +## Data generation. Pimentel page 272. + +## cowmilkYield3 <- read.table("clipboard", header=FALSE, sep="\t") +## cowmilkYield3[, 5] <- as.numeric(sub(x=cowmilkYield3[, 5], ",", ".")) +## names(cowmilkYield3) <- c("period", "block", "cow", "treat", "yield") +## dput(cowmilkYield3) + +cowmilkYield3 <- data.frame( + period = factor(c(1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, + 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, + 3, 3)), + block = factor(c(1, 1, 1, 1, 1, 1, 2, 2, 2, 3, 3, 3, 1, 1, 1, 1, 1, + 1, 2, 2, 2, 3, 3, 3, 1, 1, 1, 1, 1, 1, 2, 2, 2, 3, + 3, 3)), + cow = factor(c(1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 1, 2, 3, 4, 5, + 6, 7, 8, 9, 10, 11, 12, 1, 2, 3, 4, 5, 6, 7, 8, 9, + 10, 11, 12)), + treat = factor(c(1, 2, 3, 1, 2, 3, 1, 2, 3, 1, 2, 3, 2, 3, 1, 3, 1, + 2, 3, 1, 2, 2, 3, 1, 1, 2, 3, 1, 2, 3, 1, 2, 3, 1, + 2, 3)), + yield = c(34.6, 22.8, 32.9, 48.9, 21.8, 25.4, 30.4, 35.2, 30.8, + 38.7, 25.7, 21.4, 32.3, 21, 33.1, 46.9, 23.9, 26, 29.5, + 33.5, 29.3, 37.4, 26.1, 22, 28.5, 18.6, 27.5, 42, 21.7, + 23.9, 26.7, 28.4, 26.4, 34.4, 23.4, 19.4)) + +str(cowmilkYield3) + +save(cowmilkYield3, file="../data/cowmilkYield3.RData") + +##---------------------------------------------------------------------- + +m0 <- aov(yield~period+block+cow+treat, + data=cowmilkYield3) +anova(m0) + +with(cowmilkYield3, tapply(yield, list(block, period), FUN=sum)) +unstack(x=cowmilkYield3, form=yield~cow) + +db <- reshape(data=cowmilkYield3, idvar="cow", timevar="period", + v.names="yield", direction="wide") + +db$y <- apply(db[, 4:6], MARGIN=1, + FUN=function(x) sum(x*c(1,-2,1))) + +m0 <- aov(y~block+treat, data=db) +anova(m0) + +## This results differs from the book. I don't know why. + +##---------------------------------------------------------------------- +## Examples. + +library(lattice) + +data(cowmilkYield3) +str(cowmilkYield3) + +xyplot(yield~period|cow, groups=treat, + data=cowmilkYield3, type="o", + ylab=expression(Milk~yield~(kg)), + xlab="Period") + +rm(list=ls()) +load("../data/cowmilkYield3.RData") +ls() +str(cowmilkYield3)