diff --git a/NAMESPACE b/NAMESPACE index bc47691aa40d6df8ba5af6d98a37f548024eced3..21f9f2a5f88a4e1797b44235f974560ed2657eac 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -12,22 +12,14 @@ S3method(vcov,mcglm) export(fit_mcglm) export(mc_bias_corrected_std) export(mc_dexp_gold) -export(mc_dfbetaOij) -export(mc_fast_forward) -export(mc_influence) export(mc_initial_values) export(mc_link_function) export(mc_matrix_linear_predictor) -export(mc_qll) export(mc_quasi_score) export(mc_robust_std) -export(mc_rw1) -export(mc_rw2) export(mc_sic) export(mc_sic_covariance) -export(mc_unstructured) export(mc_variance_function) export(mcglm) -export(qic.mcglm) import(Matrix) import(assertthat) diff --git a/man/mc_dfbetaOij.Rd b/man/mc_dfbetaOij.Rd deleted file mode 100644 index b7f16ea6816d72b1d9533b0886436e2eff8ea577..0000000000000000000000000000000000000000 --- a/man/mc_dfbetaOij.Rd +++ /dev/null @@ -1,31 +0,0 @@ -% Generated by roxygen2 (4.1.1): do not edit by hand -% Please edit documentation in R/mc_influence.R -\name{mc_dfbetaOij} -\alias{mc_dfbetaOij} -\title{Influence measures for McGLMs} -\usage{ -mc_dfbetaOij(Di, Ci, inv_Ci, ri, inv_M) -} -\arguments{ -\item{Di}{D matrix for the cluster i.} - -\item{Ci}{C matrix for the cluster i.} - -\item{inv_Ci}{Inverse of C matrix for the cluster i.} - -\item{ri}{Residual vector for the cluster i.} - -\item{inv_M}{Inverse of variance/covariance of regression parameters.} -} -\value{ -Matrix with the DFBETA for observation in the cluster i. -} -\description{ -Compute influence measures for multivariate covariance -generalized linear models. Leverage, DFBETA and Cook's distance -for observations. Auxiliar function for \code{mc_influence}. -} -\author{ -Wagner Hugo Bonat, \email{wbonat@ufpr.br} -} - diff --git a/man/mc_fast_forward.Rd b/man/mc_fast_forward.Rd deleted file mode 100644 index 242ad846be21fafcbcc931ad2c57d52efe4a5442..0000000000000000000000000000000000000000 --- a/man/mc_fast_forward.Rd +++ /dev/null @@ -1,28 +0,0 @@ -% Generated by roxygen2 (4.1.1): do not edit by hand -% Please edit documentation in R/mc_fast_forward.R -\name{mc_fast_forward} -\alias{mc_fast_forward} -\title{Fast forward selection for multivariate covariance generalized linear -models.} -\usage{ -mc_fast_forward(object, scope, interaction = 1, penalty = 2, n_max = 10) -} -\arguments{ -\item{object}{an object representing a model of \code{mcglm} class.} - -\item{scope}{a vector specyfing the covariate to be tested.} - -\item{interaction}{Maximum number of covariates interacting.} - -\item{penalty}{penalty term (default = 2).} - -\item{n_max}{Maximum number of models to be fitted.} -} -\value{ -The selected model. -} -\description{ -Perform fast forward model selection using the score -information criterion. This function works only for univariate months. -} - diff --git a/man/mc_influence.Rd b/man/mc_influence.Rd deleted file mode 100644 index 6f80a608812d7d68c2a6baf12ca6b82110475967..0000000000000000000000000000000000000000 --- a/man/mc_influence.Rd +++ /dev/null @@ -1,27 +0,0 @@ -% Generated by roxygen2 (4.1.1): do not edit by hand -% Please edit documentation in R/mc_influence.R -\name{mc_influence} -\alias{mc_influence} -\title{Influence measures for McGLMs} -\usage{ -mc_influence(object, id) -} -\arguments{ -\item{object}{An object of \code{mcglm} class.} - -\item{id}{a vector which identifies the clusters. -The length and order of id should match with the number of -observations.} -} -\value{ -A list with influence measures for cluster and observations. -} -\description{ -Compute influence measures for multivariate covariance -generalized linear models. Leverage, DFBETA and Cook's distance -for unit sample and observations. -} -\author{ -Wagner Hugo Bonat, \email{wbonat@ufpr.br} -} - diff --git a/man/mc_qll.Rd b/man/mc_qll.Rd deleted file mode 100644 index 7de1f9f44baf290c559806a32271f49e2ab9befc..0000000000000000000000000000000000000000 --- a/man/mc_qll.Rd +++ /dev/null @@ -1,24 +0,0 @@ -% Generated by roxygen2 (4.1.1): do not edit by hand -% Please edit documentation in R/mc_qll.R -\name{mc_qll} -\alias{mc_qll} -\title{Compute quasi-likelihood function.} -\usage{ -mc_qll(y, mu, variance, power) -} -\arguments{ -\item{y}{A vector of observed values.} - -\item{mu}{A vector of fitted values.} - -\item{variance}{Variance function (constant, tweedie, poisson_tweedie, binomial).} - -\item{power}{Power parameter value.} -} -\value{ -The quasi-likelihood values. -} -\description{ -Given a variance function mc_qll function computes the quasi-likelihood values. -} - diff --git a/man/mc_rw1.Rd b/man/mc_rw1.Rd deleted file mode 100644 index 4c7a136378607fbee49b92e3977198fcbc826240..0000000000000000000000000000000000000000 --- a/man/mc_rw1.Rd +++ /dev/null @@ -1,20 +0,0 @@ -% Generated by roxygen2 (4.1.1): do not edit by hand -% Please edit documentation in R/mc_rw1.R -\name{mc_rw1} -\alias{mc_rw1} -\title{Random walk first order model} -\usage{ -mc_rw1(n_time, intrinsic = TRUE) -} -\arguments{ -\item{n_time}{Number observations time.} - -\item{intrinsic}{Logical indicating if the models is intrinsic (rho = 1) or not.} -} -\value{ -A matrix. Note that the function assumes that the data are in the correct order. -} -\description{ -Builds a random walk first order model matrix. -} - diff --git a/man/mc_rw2.Rd b/man/mc_rw2.Rd deleted file mode 100644 index b8c7ee1500e87c1ae627518c1296f2619a871872..0000000000000000000000000000000000000000 --- a/man/mc_rw2.Rd +++ /dev/null @@ -1,20 +0,0 @@ -% Generated by roxygen2 (4.1.1): do not edit by hand -% Please edit documentation in R/mc_rw2.R -\name{mc_rw2} -\alias{mc_rw2} -\title{Random walk second order model} -\usage{ -mc_rw2(n_time, intrinsic = TRUE) -} -\arguments{ -\item{n_time}{Number observations time.} - -\item{intrinsic}{Logical indicating if the models is intrinsic (rho = 1) or not.} -} -\value{ -A matrix. Note that the function assumes that the data are in the correct order. -} -\description{ -Builds a random walk second order model matrix. -} - diff --git a/man/mc_unstructured.Rd b/man/mc_unstructured.Rd deleted file mode 100644 index 52e12987bc6a47f591ad7751770d43f3465a34e4..0000000000000000000000000000000000000000 --- a/man/mc_unstructured.Rd +++ /dev/null @@ -1,18 +0,0 @@ -% Generated by roxygen2 (4.1.1): do not edit by hand -% Please edit documentation in R/mc_unstructured.R -\name{mc_unstructured} -\alias{mc_unstructured} -\title{Unstructured model} -\usage{ -mc_unstructured(n_time) -} -\arguments{ -\item{n_time}{Number of observations per unit sample.} -} -\value{ -A matrix. Note that the function assumes that the data are in the correct order. -} -\description{ -Builds a unstructured model matrix. -} - diff --git a/man/qic.mcglm.Rd b/man/qic.mcglm.Rd deleted file mode 100644 index 02235c1afd4b475b93b3badb8ff5f0aed4dd594f..0000000000000000000000000000000000000000 --- a/man/qic.mcglm.Rd +++ /dev/null @@ -1,25 +0,0 @@ -% Generated by roxygen2 (4.1.1): do not edit by hand -% Please edit documentation in R/mc_qic.R -\name{qic.mcglm} -\alias{qic.mcglm} -\title{Compute Quasi Information Criterion (QIC) for McGLMs.} -\usage{ -qic.mcglm(object, object.iid) -} -\arguments{ -\item{object}{An object of \code{mcglm} class.} - -\item{object.iid}{An object of \code{mcglm} class contained the model - fitted using independent covariance structure.} -} -\value{ -The QIC value. -} -\description{ -\code{qic.mcglm} is a function which computes the QIC - for McGLMs. -} -\author{ -Wagner Hugo Bonat, \email{wbonat@ufpr.br} -} -